No. words: 1739; after pruning: 1699


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:1161)  544  0.87 0.00 0.00  BF200942Ta15P034D07P003F101F1_052.ab1      278   854 (0)  C BF200942Ta15P034D07P003F101R1_052.ab1   (0)   885   309 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    BF200942Ta15P034D07P003F101F1_052.ab1     1 
  479  C BF200942Ta15P034D07P003F101R1_052.ab1   684 
  487    BF200942Ta15P034D07P003F101F1_052.ab1   487 
  524  C BF200942Ta15P034D07P003F101R1_052.ab1   639 
  540    BF200942Ta15P034D07P003F101F1_052.ab1   540 
  555  C BF200942Ta15P034D07P003F101R1_052.ab1   608 
  599    BF200942Ta15P034D07P003F101F1_052.ab1   599 
  607  C BF200942Ta15P034D07P003F101R1_052.ab1   556 
Contig length: old 1162, new 1162

Contig length: old 1162, new 1162
New start: 0