No. words: 1719; after pruning: 1693


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:1163)  535  0.00 0.00 0.00  BF200942Ta19P034D07P003F101F1_075.ab1      318   872 (0)  C BF200942Ta19P034D07P003F101R1_075.ab1   (0)   847   293 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1    BF200942Ta19P034D07P003F101F1_075.ab1     1 
  474  C BF200942Ta19P034D07P003F101R1_075.ab1   691 
  478    BF200942Ta19P034D07P003F101F1_075.ab1   478 
  514  C BF200942Ta19P034D07P003F101R1_075.ab1   651 
  546    BF200942Ta19P034D07P003F101F1_075.ab1   546 
  550  C BF200942Ta19P034D07P003F101R1_075.ab1   615 
  626    BF200942Ta19P034D07P003F101F1_075.ab1   626 
  630  C BF200942Ta19P034D07P003F101R1_075.ab1   535 
Contig length: old 1164, new 1164

Contig length: old 1164, new 1164
New start: 0