No. words: 1688; after pruning: 1662


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:1127)  492  2.33 0.36 0.00  BF200942Ta19P034H06P003F101F1_096.ab1      276   833 (0)  C BF200942Ta19P034H06P003F101R1_096.ab1   (0)   855   296 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1    BF200942Ta19P034H06P003F101F1_096.ab1     1 
  366  C BF200942Ta19P034H06P003F101R1_096.ab1   764 
  370    BF200942Ta19P034H06P003F101F1_096.ab1   370 
  378  C BF200942Ta19P034H06P003F101R1_096.ab1   752 
  386    BF200942Ta19P034H06P003F101F1_096.ab1   386 
  390  C BF200942Ta19P034H06P003F101R1_096.ab1   740 
  406    BF200942Ta19P034H06P003F101F1_096.ab1   406 
  410  C BF200942Ta19P034H06P003F101R1_096.ab1   720 
  454    BF200942Ta19P034H06P003F101F1_096.ab1   454 
  462  C BF200942Ta19P034H06P003F101R1_096.ab1   668 
  482    BF200942Ta19P034H06P003F101F1_096.ab1   482 
  486  C BF200942Ta19P034H06P003F101R1_096.ab1   644 
  494    BF200942Ta19P034H06P003F101F1_096.ab1   494 
  498  C BF200942Ta19P034H06P003F101R1_096.ab1   632 
  502    BF200942Ta19P034H06P003F101F1_096.ab1   502 
  653  C BF200942Ta19P034H06P003F101R1_096.ab1   476 
  657    BF200942Ta19P034H06P003F101F1_096.ab1   657 
  673  C BF200942Ta19P034H06P003F101R1_096.ab1   456 
  685    BF200942Ta19P034H06P003F101F1_096.ab1   685 
  689  C BF200942Ta19P034H06P003F101R1_096.ab1   440 
  697    BF200942Ta19P034H06P003F101F1_096.ab1   697 
  701  C BF200942Ta19P034H06P003F101R1_096.ab1   428 
  705    BF200942Ta19P034H06P003F101F1_096.ab1   705 
  709  C BF200942Ta19P034H06P003F101R1_096.ab1   420 
  717    BF200942Ta19P034H06P003F101F1_096.ab1   717 
  721  C BF200942Ta19P034H06P003F101R1_096.ab1   408 
  729    BF200942Ta19P034H06P003F101F1_096.ab1   729 
  733  C BF200942Ta19P034H06P003F101R1_096.ab1   396 
  737    BF200942Ta19P034H06P003F101F1_096.ab1   737 
  753  C BF200942Ta19P034H06P003F101R1_096.ab1   376 
  757    BF200942Ta19P034H06P003F101F1_096.ab1   757 
  776  C BF200942Ta19P034H06P003F101R1_096.ab1   353 
  784    BF200942Ta19P034H06P003F101F1_096.ab1   784 
  800  C BF200942Ta19P034H06P003F101R1_096.ab1   329 
  816    BF200942Ta19P034H06P003F101F1_096.ab1   816 
  824  C BF200942Ta19P034H06P003F101R1_096.ab1   305 
Contig length: old 1128, new 1128

Contig length: old 1128, new 1128
New start: 0