No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:1161)  479  0.20 0.00 0.00  BF200942Ta21P034D07P003F101F1_071.ab1      284   784 (0)  C BF200942Ta21P034D07P003F101R1_071.ab1   (0)   879   379 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1    BF200942Ta21P034D07P003F101F1_071.ab1     1 
  481  C BF200942Ta21P034D07P003F101R1_071.ab1   682 
  485    BF200942Ta21P034D07P003F101F1_071.ab1   485 
  541  C BF200942Ta21P034D07P003F101R1_071.ab1   622 
  545    BF200942Ta21P034D07P003F101F1_071.ab1   545 
  549  C BF200942Ta21P034D07P003F101R1_071.ab1   614 
  553    BF200942Ta21P034D07P003F101F1_071.ab1   553 
  557  C BF200942Ta21P034D07P003F101R1_071.ab1   606 
  601    BF200942Ta21P034D07P003F101F1_071.ab1   601 
  605  C BF200942Ta21P034D07P003F101R1_071.ab1   558 
Contig length: old 1162, new 1162

Contig length: old 1162, new 1162
New start: 0