No. words: 1599; after pruning: 1573


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:1169)  409  0.23 0.00 0.00  BF200942Ta22P034D07P003F101F1_069.ab1      308   736 (0)  C BF200942Ta22P034D07P003F101R1_069.ab1   (0)   863   435 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1    BF200942Ta22P034D07P003F101F1_069.ab1     1 
  479  C BF200942Ta22P034D07P003F101R1_069.ab1   692 
  491    BF200942Ta22P034D07P003F101F1_069.ab1   491 
  495  C BF200942Ta22P034D07P003F101R1_069.ab1   676 
  499    BF200942Ta22P034D07P003F101F1_069.ab1   499 
  507  C BF200942Ta22P034D07P003F101R1_069.ab1   664 
  511    BF200942Ta22P034D07P003F101F1_069.ab1   511 
  527  C BF200942Ta22P034D07P003F101R1_069.ab1   644 
  531    BF200942Ta22P034D07P003F101F1_069.ab1   531 
  535  C BF200942Ta22P034D07P003F101R1_069.ab1   636 
  539    BF200942Ta22P034D07P003F101F1_069.ab1   539 
  543  C BF200942Ta22P034D07P003F101R1_069.ab1   628 
  547    BF200942Ta22P034D07P003F101F1_069.ab1   547 
  558  C BF200942Ta22P034D07P003F101R1_069.ab1   613 
Contig length: old 1170, new 1170

Contig length: old 1170, new 1170
New start: 0