No. words: 1648; after pruning: 1622


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:1170)  459  0.00 0.00 0.00  BF200942Ta23P034D07P003F101F1_067.ab1      315   791 (0)  C BF200942Ta23P034D07P003F101R1_067.ab1   (0)   857   381 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    BF200942Ta23P034D07P003F101F1_067.ab1     1 
  490  C BF200942Ta23P034D07P003F101R1_067.ab1   682 
  494    BF200942Ta23P034D07P003F101F1_067.ab1   494 
  522  C BF200942Ta23P034D07P003F101R1_067.ab1   650 
  534    BF200942Ta23P034D07P003F101F1_067.ab1   534 
  542  C BF200942Ta23P034D07P003F101R1_067.ab1   630 
  550    BF200942Ta23P034D07P003F101F1_067.ab1   550 
  558  C BF200942Ta23P034D07P003F101R1_067.ab1   614 
  578    BF200942Ta23P034D07P003F101F1_067.ab1   578 
  582  C BF200942Ta23P034D07P003F101R1_067.ab1   590 
Contig length: old 1171, new 1171

Contig length: old 1171, new 1171
New start: 0