No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:1156)  389  0.00 0.24 0.00  BF200942Ta24P034D07P003F101F1_065.ab1      375   783 (0)  C BF200942Ta24P034D07P003F101R1_065.ab1   (0)   784   375 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1    BF200942Ta24P034D07P003F101F1_065.ab1     1 
  499  C BF200942Ta24P034D07P003F101R1_065.ab1   659 
  503    BF200942Ta24P034D07P003F101F1_065.ab1   503 
  523  C BF200942Ta24P034D07P003F101R1_065.ab1   635 
  531    BF200942Ta24P034D07P003F101F1_065.ab1   531 
  539  C BF200942Ta24P034D07P003F101R1_065.ab1   619 
  551    BF200942Ta24P034D07P003F101F1_065.ab1   551 
  563  C BF200942Ta24P034D07P003F101R1_065.ab1   595 
Contig length: old 1157, new 1157

Contig length: old 1157, new 1157
New start: 0