No. words: 1681; after pruning: 1655


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:1115)  545  0.00 0.00 0.00  BF200942Td03P034H06P003F101F1_078.ab1      325   889 (0)  C BF200942Td03P034H06P003F101R1_078.ab1   (0)   792   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1    BF200942Td03P034H06P003F101F1_078.ab1     1 
  608  C BF200942Td03P034H06P003F101R1_078.ab1   509 
  624    BF200942Td03P034H06P003F101F1_078.ab1   624 
  628  C BF200942Td03P034H06P003F101R1_078.ab1   489 
  636    BF200942Td03P034H06P003F101F1_078.ab1   636 
  660  C BF200942Td03P034H06P003F101R1_078.ab1   457 
  668    BF200942Td03P034H06P003F101F1_078.ab1   668 
  688  C BF200942Td03P034H06P003F101R1_078.ab1   429 
Contig length: old 1116, new 1116

Contig length: old 1116, new 1116
New start: 0