No. words: 1714; after pruning: 1674


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:1114)  566  0.17 0.34 0.00  BF200942Td06P034H06P003F101F1_072.ab1      257   853 (0)  C BF200942Td06P034H06P003F101R1_072.ab1   (0)   861   263 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1    BF200942Td06P034H06P003F101F1_072.ab1     1 
  676  C BF200942Td06P034H06P003F101R1_072.ab1   440 
  692    BF200942Td06P034H06P003F101F1_072.ab1   692 
  696  C BF200942Td06P034H06P003F101R1_072.ab1   420 
Contig length: old 1115, new 1115

Contig length: old 1115, new 1115
New start: 0