No. words: 1695; after pruning: 1669


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:1122)  544  0.35 0.00 0.00  BF200942Td08P034H06P003F101F1_068.ab1      229   800 (0)  C BF200942Td08P034H06P003F101R1_068.ab1   (0)   895   324 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1    BF200942Td08P034H06P003F101F1_068.ab1     1 
  493  C BF200942Td08P034H06P003F101R1_068.ab1   631 
  521    BF200942Td08P034H06P003F101F1_068.ab1   521 
  525  C BF200942Td08P034H06P003F101R1_068.ab1   599 
  533    BF200942Td08P034H06P003F101F1_068.ab1   533 
  537  C BF200942Td08P034H06P003F101R1_068.ab1   587 
  549    BF200942Td08P034H06P003F101F1_068.ab1   549 
  569  C BF200942Td08P034H06P003F101R1_068.ab1   555 
  581    BF200942Td08P034H06P003F101F1_068.ab1   581 
  601  C BF200942Td08P034H06P003F101R1_068.ab1   523 
Contig length: old 1123, new 1123

Contig length: old 1123, new 1123
New start: 0