No. words: 1705; after pruning: 1679


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:1121)  549  0.34 0.34 0.00  BF200942Td09P034H06P003F101F1_066.ab1      315   895 (0)  C BF200942Td09P034H06P003F101R1_066.ab1   (0)   810   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1    BF200942Td09P034H06P003F101F1_066.ab1     1 
  614  C BF200942Td09P034H06P003F101R1_066.ab1   510 
  622    BF200942Td09P034H06P003F101F1_066.ab1   622 
  630  C BF200942Td09P034H06P003F101R1_066.ab1   494 
  638    BF200942Td09P034H06P003F101F1_066.ab1   638 
  646  C BF200942Td09P034H06P003F101R1_066.ab1   478 
Contig length: old 1122, new 1123

Contig length: old 1123, new 1123
New start: 0