No. words: 1003; after pruning: 977


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:338)  328  0.00 0.00 0.29  BF201691Ld07P027A02P027A081F1_028.ab1        1   339 (172)  C BF201691Ld07P027A02P027A081R1_028.ab1   (154)   338     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C BF201691Ld07P027A02P027A081R1_028.ab1   492 
  194    BF201691Ld07P027A02P027A081F1_028.ab1    40 
  202  C BF201691Ld07P027A02P027A081R1_028.ab1   291 
  210    BF201691Ld07P027A02P027A081F1_028.ab1    56 
  218  C BF201691Ld07P027A02P027A081R1_028.ab1   275 
  254    BF201691Ld07P027A02P027A081F1_028.ab1   100 
  266  C BF201691Ld07P027A02P027A081R1_028.ab1   227 
  278    BF201691Ld07P027A02P027A081F1_028.ab1   124 
  294  C BF201691Ld07P027A02P027A081R1_028.ab1   199 
  362    BF201691Ld07P027A02P027A081F1_028.ab1   208 
Contig length: old 664, new 665

Contig length: old 665, new 665
New start: 0