No. words: 1791; after pruning: 1751


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.7 (1,1:981)  778  0.37 0.00 0.00  BF201705As02P027B02P027B081F1_060.ab1       91   899 (0)  C BF201705As02P027B02P027B081R1_060.ab1   (0)   892    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1    BF201705As02P027B02P027B081F1_060.ab1     1 
  126  C BF201705As02P027B02P027B081R1_060.ab1   857 
  134    BF201705As02P027B02P027B081F1_060.ab1   134 
  658  C BF201705As02P027B02P027B081R1_060.ab1   325 
  838    BF201705As02P027B02P027B081F1_060.ab1   838 
  848  C BF201705As02P027B02P027B081R1_060.ab1   135 
Contig length: old 982, new 982

Contig length: old 982, new 982
New start: 0