No. words: 1559; after pruning: 1533


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:938)  598  0.16 0.00 0.00  BF201705At02P027B02P027B081F1_056.ab1      150   769 (0)  C BF201705At02P027B02P027B081R1_056.ab1   (0)   790   171 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1    BF201705At02P027B02P027B081F1_056.ab1     1 
  365  C BF201705At02P027B02P027B081R1_056.ab1   575 
  369    BF201705At02P027B02P027B081F1_056.ab1   369 
  433  C BF201705At02P027B02P027B081R1_056.ab1   507 
  445    BF201705At02P027B02P027B081F1_056.ab1   445 
  453  C BF201705At02P027B02P027B081R1_056.ab1   487 
  465    BF201705At02P027B02P027B081F1_056.ab1   465 
  469  C BF201705At02P027B02P027B081R1_056.ab1   471 
  473    BF201705At02P027B02P027B081F1_056.ab1   473 
  533  C BF201705At02P027B02P027B081R1_056.ab1   407 
  537    BF201705At02P027B02P027B081F1_056.ab1   537 
  541  C BF201705At02P027B02P027B081R1_056.ab1   399 
  549    BF201705At02P027B02P027B081F1_056.ab1   549 
  553  C BF201705At02P027B02P027B081R1_056.ab1   387 
  557    BF201705At02P027B02P027B081F1_056.ab1   557 
  561  C BF201705At02P027B02P027B081R1_056.ab1   379 
  565    BF201705At02P027B02P027B081F1_056.ab1   565 
  569  C BF201705At02P027B02P027B081R1_056.ab1   371 
  573    BF201705At02P027B02P027B081F1_056.ab1   573 
  585  C BF201705At02P027B02P027B081R1_056.ab1   355 
  597    BF201705At02P027B02P027B081F1_056.ab1   597 
  601  C BF201705At02P027B02P027B081R1_056.ab1   339 
  609    BF201705At02P027B02P027B081F1_056.ab1   609 
  613  C BF201705At02P027B02P027B081R1_056.ab1   327 
  629    BF201705At02P027B02P027B081F1_056.ab1   629 
  633  C BF201705At02P027B02P027B081R1_056.ab1   307 
  637    BF201705At02P027B02P027B081F1_056.ab1   637 
  641  C BF201705At02P027B02P027B081R1_056.ab1   299 
Contig length: old 939, new 939

Contig length: old 939, new 939
New start: 0