No. words: 1716; after pruning: 1690


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:990)  695  0.14 0.00 0.00  BF201705Ld07P027B02P027B081F1_052.ab1      126   850 (0)  C BF201705Ld07P027B02P027B081R1_052.ab1   (0)   866   142 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    BF201705Ld07P027B02P027B081F1_052.ab1     1 
  489  C BF201705Ld07P027B02P027B081R1_052.ab1   503 
  497    BF201705Ld07P027B02P027B081F1_052.ab1   497 
  521  C BF201705Ld07P027B02P027B081R1_052.ab1   471 
  525    BF201705Ld07P027B02P027B081F1_052.ab1   525 
  529  C BF201705Ld07P027B02P027B081R1_052.ab1   463 
  533    BF201705Ld07P027B02P027B081F1_052.ab1   533 
  561  C BF201705Ld07P027B02P027B081R1_052.ab1   431 
  569    BF201705Ld07P027B02P027B081F1_052.ab1   569 
  601  C BF201705Ld07P027B02P027B081R1_052.ab1   391 
  605    BF201705Ld07P027B02P027B081F1_052.ab1   605 
  613  C BF201705Ld07P027B02P027B081R1_052.ab1   379 
  629    BF201705Ld07P027B02P027B081F1_052.ab1   629 
  633  C BF201705Ld07P027B02P027B081R1_052.ab1   359 
Contig length: old 991, new 991

Contig length: old 991, new 991
New start: 0