No. words: 1565; after pruning: 1539


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:997)  545  0.00 0.00 0.00  BF201705Ld08P027B02P027B081F1_050.ab1      200   766 (0)  C BF201705Ld08P027B02P027B081R1_050.ab1   (0)   799   233 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1    BF201705Ld08P027B02P027B081F1_050.ab1     1 
  455  C BF201705Ld08P027B02P027B081R1_050.ab1   544 
  467    BF201705Ld08P027B02P027B081F1_050.ab1   467 
  471  C BF201705Ld08P027B02P027B081R1_050.ab1   528 
  495    BF201705Ld08P027B02P027B081F1_050.ab1   495 
  499  C BF201705Ld08P027B02P027B081R1_050.ab1   500 
  519    BF201705Ld08P027B02P027B081F1_050.ab1   519 
  527  C BF201705Ld08P027B02P027B081R1_050.ab1   472 
Contig length: old 998, new 998

Contig length: old 998, new 998
New start: 0