No. words: 1254; after pruning: 1228


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:470)  443  1.06 0.00 0.00  BF202635Ld01P078H04P078H101F1_092.ab1        1   471 (147)  C BF202635Ld01P078H04P078H101R1_092.ab1   (165)   471     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BF202635Ld01P078H04P078H101R1_092.ab1   636 
  315    BF202635Ld01P078H04P078H101F1_092.ab1   150 
  323  C BF202635Ld01P078H04P078H101R1_092.ab1   314 
  431    BF202635Ld01P078H04P078H101F1_092.ab1   266 
  435  C BF202635Ld01P078H04P078H101R1_092.ab1   202 
  479    BF202635Ld01P078H04P078H101F1_092.ab1   314 
  499  C BF202635Ld01P078H04P078H101R1_092.ab1   138 
  535    BF202635Ld01P078H04P078H101F1_092.ab1   370 
  539  C BF202635Ld01P078H04P078H101R1_092.ab1    98 
  547    BF202635Ld01P078H04P078H101F1_092.ab1   382 
  559  C BF202635Ld01P078H04P078H101R1_092.ab1    78 
  575    BF202635Ld01P078H04P078H101F1_092.ab1   410 
Contig length: old 783, new 783

Contig length: old 783, new 783
New start: 0