No. words: 903; after pruning: 877


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:405)  398  0.00 0.00 0.00  BF202635Ta14P078H04P095B111F1_078.ab1        1   406 (51)  C BF202635Ta14P078H04P095B111R1_078.ab1   (40)   406     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BF202635Ta14P078H04P095B111R1_078.ab1   446 
   80    BF202635Ta14P078H04P095B111F1_078.ab1    40 
   84  C BF202635Ta14P078H04P095B111R1_078.ab1   363 
  152    BF202635Ta14P078H04P095B111F1_078.ab1   112 
  184  C BF202635Ta14P078H04P095B111R1_078.ab1   263 
  188    BF202635Ta14P078H04P095B111F1_078.ab1   148 
  204  C BF202635Ta14P078H04P095B111R1_078.ab1   243 
  296    BF202635Ta14P078H04P095B111F1_078.ab1   256 
  316  C BF202635Ta14P078H04P095B111R1_078.ab1   131 
  320    BF202635Ta14P078H04P095B111F1_078.ab1   280 
  384  C BF202635Ta14P078H04P095B111R1_078.ab1    63 
  408    BF202635Ta14P078H04P095B111F1_078.ab1   368 
Contig length: old 497, new 497

Contig length: old 497, new 497
New start: 0