No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:690)  542  0.86 0.00 0.34  BF202765Ld03P078A05P078A111F1_001.ab1       24   605 (0)  C BF202765Ld03P078A05P078A111R1_001.ab1   (0)   667    88 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BF202765Ld03P078A05P078A111F1_001.ab1     1 
  312  C BF202765Ld03P078A05P078A111R1_001.ab1   381 
  332    BF202765Ld03P078A05P078A111F1_001.ab1   332 
  368  C BF202765Ld03P078A05P078A111R1_001.ab1   325 
  388    BF202765Ld03P078A05P078A111F1_001.ab1   388 
  404  C BF202765Ld03P078A05P078A111R1_001.ab1   289 
Contig length: old 691, new 692

Contig length: old 692, new 692
New start: 0 
S Change at: 39; seg lengths: entry 4, contig 4