No. words: 1810; after pruning: 1784


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:755)  725  0.00 0.13 0.13  BF202765Ld08P078A05P078A111F1_062.ab1        1   756 (164)  C BF202765Ld08P078A05P078A111R1_062.ab1   (134)   756     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C BF202765Ld08P078A05P078A111R1_062.ab1   890 
  148    BF202765Ld08P078A05P078A111F1_062.ab1    13 
  164  C BF202765Ld08P078A05P078A111R1_062.ab1   727 
  176    BF202765Ld08P078A05P078A111F1_062.ab1    41 
  180  C BF202765Ld08P078A05P078A111R1_062.ab1   711 
  184    BF202765Ld08P078A05P078A111F1_062.ab1    49 
  272  C BF202765Ld08P078A05P078A111R1_062.ab1   619 
  464    BF202765Ld08P078A05P078A111F1_062.ab1   329 
  644  C BF202765Ld08P078A05P078A111R1_062.ab1   247 
  792    BF202765Ld08P078A05P078A111F1_062.ab1   657 
  800  C BF202765Ld08P078A05P078A111R1_062.ab1    91 
  840    BF202765Ld08P078A05P078A111F1_062.ab1   705 
  852  C BF202765Ld08P078A05P078A111R1_062.ab1    39 
  860    BF202765Ld08P078A05P078A111F1_062.ab1   725 
Contig length: old 1054, new 1055

Contig length: old 1055, new 1055
New start: 0