No. words: 1741; after pruning: 1715


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:755)  712  0.79 0.13 0.00  BF202765Ld09P078A05P078A111F1_060.ab1        1   756 (120)  C BF202765Ld09P078A05P078A111R1_060.ab1   (108)   757     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C BF202765Ld09P078A05P078A111R1_060.ab1   865 
  112    BF202765Ld09P078A05P078A111F1_060.ab1     4 
  116  C BF202765Ld09P078A05P078A111R1_060.ab1   750 
  125    BF202765Ld09P078A05P078A111F1_060.ab1    16 
  606  C BF202765Ld09P078A05P078A111R1_060.ab1   260 
  850    BF202765Ld09P078A05P078A111F1_060.ab1   741 
  854  C BF202765Ld09P078A05P078A111R1_060.ab1    12 
  862    BF202765Ld09P078A05P078A111F1_060.ab1   753 
Contig length: old 985, new 985

Contig length: old 985, new 985
New start: 0