No. words: 1550; after pruning: 1524


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:758)  718  0.13 0.13 0.13  BF202765Tu01P078A05P078A111F1_058.ab1        1   754 (0)  C BF202765Tu01P078A05P078A111R1_058.ab1   (37)   759     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  368 nodes

 186 str. conn. components

Path
    1  C BF202765Tu01P078A05P078A111R1_058.ab1   796 
   59    BF202765Tu01P078A05P078A111F1_058.ab1    21 
   63  C BF202765Tu01P078A05P078A111R1_058.ab1   734 
   67    BF202765Tu01P078A05P078A111F1_058.ab1    29 
  123  C BF202765Tu01P078A05P078A111R1_058.ab1   674 
  131    BF202765Tu01P078A05P078A111F1_058.ab1    93 
  155  C BF202765Tu01P078A05P078A111R1_058.ab1   642 
  159    BF202765Tu01P078A05P078A111F1_058.ab1   121 
  175  C BF202765Tu01P078A05P078A111R1_058.ab1   622 
  183    BF202765Tu01P078A05P078A111F1_058.ab1   145 
  207  C BF202765Tu01P078A05P078A111R1_058.ab1   590 
  211    BF202765Tu01P078A05P078A111F1_058.ab1   173 
  223  C BF202765Tu01P078A05P078A111R1_058.ab1   574 
  227    BF202765Tu01P078A05P078A111F1_058.ab1   189 
  231  C BF202765Tu01P078A05P078A111R1_058.ab1   566 
  255    BF202765Tu01P078A05P078A111F1_058.ab1   217 
  263  C BF202765Tu01P078A05P078A111R1_058.ab1   534 
  275    BF202765Tu01P078A05P078A111F1_058.ab1   237 
  327  C BF202765Tu01P078A05P078A111R1_058.ab1   470 
  339    BF202765Tu01P078A05P078A111F1_058.ab1   301 
  355  C BF202765Tu01P078A05P078A111R1_058.ab1   442 
  395    BF202765Tu01P078A05P078A111F1_058.ab1   357 
  403  C BF202765Tu01P078A05P078A111R1_058.ab1   394 
  411    BF202765Tu01P078A05P078A111F1_058.ab1   373 
  419  C BF202765Tu01P078A05P078A111R1_058.ab1   378 
  439    BF202765Tu01P078A05P078A111F1_058.ab1   401 
  451  C BF202765Tu01P078A05P078A111R1_058.ab1   346 
  467    BF202765Tu01P078A05P078A111F1_058.ab1   429 
  471  C BF202765Tu01P078A05P078A111R1_058.ab1   326 
  523    BF202765Tu01P078A05P078A111F1_058.ab1   485 
  531  C BF202765Tu01P078A05P078A111R1_058.ab1   266 
  571    BF202765Tu01P078A05P078A111F1_058.ab1   533 
  575  C BF202765Tu01P078A05P078A111R1_058.ab1   222 
  603    BF202765Tu01P078A05P078A111F1_058.ab1   565 
  607  C BF202765Tu01P078A05P078A111R1_058.ab1   190 
  735    BF202765Tu01P078A05P078A111F1_058.ab1   697 
  749  C BF202765Tu01P078A05P078A111R1_058.ab1    48 
  769    BF202765Tu01P078A05P078A111F1_058.ab1   731 
  778  C BF202765Tu01P078A05P078A111R1_058.ab1    20 
Contig length: old 796, new 797

Contig length: old 797, new 797
New start: 0