No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:738)  710  0.00 0.00 0.14  BF202765Tu02P078A05P078A111F1_056.ab1        1   739 (46)  C BF202765Tu02P078A05P078A111R1_056.ab1   (44)   738     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  368 nodes

 186 str. conn. components

Path
    1  C BF202765Tu02P078A05P078A111R1_056.ab1   782 
   56    BF202765Tu02P078A05P078A111F1_056.ab1    12 
   64  C BF202765Tu02P078A05P078A111R1_056.ab1   719 
   68    BF202765Tu02P078A05P078A111F1_056.ab1    24 
   84  C BF202765Tu02P078A05P078A111R1_056.ab1   699 
   88    BF202765Tu02P078A05P078A111F1_056.ab1    44 
  152  C BF202765Tu02P078A05P078A111R1_056.ab1   631 
  156    BF202765Tu02P078A05P078A111F1_056.ab1   112 
  224  C BF202765Tu02P078A05P078A111R1_056.ab1   559 
  228    BF202765Tu02P078A05P078A111F1_056.ab1   184 
  232  C BF202765Tu02P078A05P078A111R1_056.ab1   551 
  252    BF202765Tu02P078A05P078A111F1_056.ab1   208 
  268  C BF202765Tu02P078A05P078A111R1_056.ab1   515 
  272    BF202765Tu02P078A05P078A111F1_056.ab1   228 
  284  C BF202765Tu02P078A05P078A111R1_056.ab1   499 
  288    BF202765Tu02P078A05P078A111F1_056.ab1   244 
  308  C BF202765Tu02P078A05P078A111R1_056.ab1   475 
  312    BF202765Tu02P078A05P078A111F1_056.ab1   268 
  332  C BF202765Tu02P078A05P078A111R1_056.ab1   451 
  340    BF202765Tu02P078A05P078A111F1_056.ab1   296 
  360  C BF202765Tu02P078A05P078A111R1_056.ab1   423 
  392    BF202765Tu02P078A05P078A111F1_056.ab1   348 
  408  C BF202765Tu02P078A05P078A111R1_056.ab1   375 
  412    BF202765Tu02P078A05P078A111F1_056.ab1   368 
  428  C BF202765Tu02P078A05P078A111R1_056.ab1   355 
  436    BF202765Tu02P078A05P078A111F1_056.ab1   392 
  452  C BF202765Tu02P078A05P078A111R1_056.ab1   331 
  460    BF202765Tu02P078A05P078A111F1_056.ab1   416 
  464  C BF202765Tu02P078A05P078A111R1_056.ab1   319 
  484    BF202765Tu02P078A05P078A111F1_056.ab1   440 
  496  C BF202765Tu02P078A05P078A111R1_056.ab1   287 
  520    BF202765Tu02P078A05P078A111F1_056.ab1   476 
  532  C BF202765Tu02P078A05P078A111R1_056.ab1   251 
  540    BF202765Tu02P078A05P078A111F1_056.ab1   496 
  544  C BF202765Tu02P078A05P078A111R1_056.ab1   239 
  548    BF202765Tu02P078A05P078A111F1_056.ab1   504 
  552  C BF202765Tu02P078A05P078A111R1_056.ab1   231 
  568    BF202765Tu02P078A05P078A111F1_056.ab1   524 
  576  C BF202765Tu02P078A05P078A111R1_056.ab1   207 
  580    BF202765Tu02P078A05P078A111F1_056.ab1   536 
  584  C BF202765Tu02P078A05P078A111R1_056.ab1   199 
  592    BF202765Tu02P078A05P078A111F1_056.ab1   548 
  608  C BF202765Tu02P078A05P078A111R1_056.ab1   175 
  768    BF202765Tu02P078A05P078A111F1_056.ab1   724 
Contig length: old 828, new 829

Contig length: old 829, new 829
New start: 0