No. words: 1131; after pruning: 1105


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.0 (1,1:518)  501  0.00 0.00 0.00  BF203070As01P027C02P027C081F1_050.ab1        4   519 (45)  C BF203070As01P027C02P027C081R1_050.ab1   (51)   516     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BF203070As01P027C02P027C081R1_050.ab1   567 
  175    BF203070As01P027C02P027C081F1_050.ab1   127 
  187  C BF203070As01P027C02P027C081R1_050.ab1   381 
  423    BF203070As01P027C02P027C081F1_050.ab1   375 
  459  C BF203070As01P027C02P027C081R1_050.ab1   109 
  467    BF203070As01P027C02P027C081F1_050.ab1   419 
Contig length: old 612, new 612

Contig length: old 612, new 612
New start: 0