No. words: 249; after pruning: 223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.4 -0.4 (1,1:69)   62  0.00 0.00 1.43  BF203070Sn30P027C02P059A071F1_022.ab1        1    70 (44)  C BF203070Sn30P027C02P059A071R1_022.ab1   (66)    69     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.4       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1  C BF203070Sn30P027C02P059A071R1_022.ab1   135 
   90    BF203070Sn30P027C02P059A071F1_022.ab1    24 
   94  C BF203070Sn30P027C02P059A071R1_022.ab1    42 
  110    BF203070Sn30P027C02P059A071F1_022.ab1    44 
Contig length: old 179, new 180

Contig length: old 180, new 180
New start: 0