No. words: 1022; after pruning: 996


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:439)  430  0.00 0.00 0.00  BF203070Sn30P059G06P027C081F1_021.ab1        1   440 (73)  C BF203070Sn30P059G06P027C081R1_021.ab1   (69)   440     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BF203070Sn30P059G06P027C081R1_021.ab1   509 
   73    BF203070Sn30P059G06P027C081F1_021.ab1     4 
   77  C BF203070Sn30P059G06P027C081R1_021.ab1   433 
   85    BF203070Sn30P059G06P027C081F1_021.ab1    16 
  101  C BF203070Sn30P059G06P027C081R1_021.ab1   409 
  109    BF203070Sn30P059G06P027C081F1_021.ab1    40 
  113  C BF203070Sn30P059G06P027C081R1_021.ab1   397 
  117    BF203070Sn30P059G06P027C081F1_021.ab1    48 
  129  C BF203070Sn30P059G06P027C081R1_021.ab1   381 
  193    BF203070Sn30P059G06P027C081F1_021.ab1   124 
  489  C BF203070Sn30P059G06P027C081R1_021.ab1    21 
  493    BF203070Sn30P059G06P027C081F1_021.ab1   424 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0