No. words: 1048; after pruning: 1022


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:472)  458  0.00 0.21 0.00  BF203070Ta11P059G06P027C081F1_011.ab1        1   473 (50)  C BF203070Ta11P059G06P027C081R1_011.ab1   (51)   474     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF203070Ta11P059G06P027C081R1_011.ab1   525 
  107    BF203070Ta11P059G06P027C081F1_011.ab1    55 
  111  C BF203070Ta11P059G06P027C081R1_011.ab1   415 
  263    BF203070Ta11P059G06P027C081F1_011.ab1   211 
  471  C BF203070Ta11P059G06P027C081R1_011.ab1    55 
  475    BF203070Ta11P059G06P027C081F1_011.ab1   423 
  495  C BF203070Ta11P059G06P027C081R1_011.ab1    31 
  499    BF203070Ta11P059G06P027C081F1_011.ab1   447 
Contig length: old 575, new 575

Contig length: old 575, new 575
New start: 0