No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:427)  403  0.23 0.00 0.23  BF203070Ta13P059E06P027C081F2_035.ab1        1   427 (54)  C BF203070Ta13P059E06P027C081R2_035.ab1   (62)   427     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BF203070Ta13P059E06P027C081R2_035.ab1   489 
  314    BF203070Ta13P059E06P027C081F2_035.ab1   252 
  326  C BF203070Ta13P059E06P027C081R2_035.ab1   164 
  358    BF203070Ta13P059E06P027C081F2_035.ab1   296 
Contig length: old 542, new 543

Contig length: old 543, new 543
New start: 0