No. words: 1080; after pruning: 1040


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:502)  473  0.20 0.40 0.40  BF203070Ta15P059G06P027C081F1_003.ab1        1   504 (32)  C BF203070Ta15P059G06P027C081R1_003.ab1   (40)   504     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BF203070Ta15P059G06P027C081R1_003.ab1   544 
   65    BF203070Ta15P059G06P027C081F1_003.ab1    23 
   77  C BF203070Ta15P059G06P027C081R1_003.ab1   468 
  141    BF203070Ta15P059G06P027C081F1_003.ab1    99 
  149  C BF203070Ta15P059G06P027C081R1_003.ab1   396 
  265    BF203070Ta15P059G06P027C081F1_003.ab1   223 
  495  C BF203070Ta15P059G06P027C081R1_003.ab1    50 
  499    BF203070Ta15P059G06P027C081F1_003.ab1   457 
  515  C BF203070Ta15P059G06P027C081R1_003.ab1    30 
  523    BF203070Ta15P059G06P027C081F1_003.ab1   481 
Contig length: old 577, new 578

Contig length: old 578, new 578
New start: 0