No. words: 249; after pruning: 223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    2   -2.2 -2.2 (1,1:71)   53  0.00 1.43 2.86  BF203070Ta16P027C02P059A071F1_002.ab1        3    72 (44)  C BF203070Ta16P027C02P059A071R1_002.ab1   (64)    69     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.2       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  26 nodes

 15 str. conn. components

Path
    1  C BF203070Ta16P027C02P059A071R1_002.ab1   133 
  104    BF203070Ta16P027C02P059A071F1_002.ab1    41 
Contig length: old 177, new 179

Contig length: old 179, new 179
New start: 0