No. words: 252; after pruning: 226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.9 -0.9 (1,1:73)   63  0.00 0.00 1.41  BF203070Ta18P027C02P059A071F1_029.ab1        4    74 (44)  C BF203070Ta18P027C02P059A071R1_029.ab1   (64)    70     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.9       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  34 nodes

 19 str. conn. components

Path
    1  C BF203070Ta18P027C02P059A071R1_029.ab1   134 
  108    BF203070Ta18P027C02P059A071F1_029.ab1    47 
Contig length: old 178, new 179

Contig length: old 179, new 179
New start: 0