No. words: 888; after pruning: 862


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 8.1 (1,1:396)  382  0.00 0.00 0.00  BF203070Ta18P059F06P027C081F2_032.ab1        1   392 (51)  C BF203070Ta18P059F06P027C081R2_032.ab1   (48)   397     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BF203070Ta18P059F06P027C081R2_032.ab1   445 
  260    BF203070Ta18P059F06P027C081F2_032.ab1   212 
  264  C BF203070Ta18P059F06P027C081R2_032.ab1   182 
  308    BF203070Ta18P059F06P027C081F2_032.ab1   260 
  320  C BF203070Ta18P059F06P027C081R2_032.ab1   126 
  332    BF203070Ta18P059F06P027C081F2_032.ab1   284 
  336  C BF203070Ta18P059F06P027C081R2_032.ab1   110 
  348    BF203070Ta18P059F06P027C081F2_032.ab1   300 
  356  C BF203070Ta18P059F06P027C081R2_032.ab1    90 
  360    BF203070Ta18P059F06P027C081F2_032.ab1   312 
  368  C BF203070Ta18P059F06P027C081R2_032.ab1    78 
  380    BF203070Ta18P059F06P027C081F2_032.ab1   332 
  388  C BF203070Ta18P059F06P027C081R2_032.ab1    58 
  404    BF203070Ta18P059F06P027C081F2_032.ab1   356 
Contig length: old 491, new 491

Contig length: old 491, new 491
New start: 0