No. words: 1084; after pruning: 1030


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:503)  477  0.40 0.40 0.20  BF203070Ta18P059G06P027C081F1_014.ab1        1   504 (36)  C BF203070Ta18P059G06P027C081R1_014.ab1   (39)   505     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BF203070Ta18P059G06P027C081R1_014.ab1   544 
   68    BF203070Ta18P059G06P027C081F1_014.ab1    27 
   80  C BF203070Ta18P059G06P027C081R1_014.ab1   465 
   84    BF203070Ta18P059G06P027C081F1_014.ab1    43 
  129  C BF203070Ta18P059G06P027C081R1_014.ab1   416 
  261    BF203070Ta18P059G06P027C081F1_014.ab1   220 
  498  C BF203070Ta18P059G06P027C081R1_014.ab1    47 
  502    BF203070Ta18P059G06P027C081F1_014.ab1   461 
Contig length: old 580, new 581

Contig length: old 581, new 581
New start: 0