No. words: 260; after pruning: 234


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -1.0 -1.0 (1,1:81)   60  0.00 0.00 2.70  BF203070Ta19P027C02P059A071F1_027.ab1        4    77 (42)  C BF203070Ta19P027C02P059A071R1_027.ab1   (64)    77     6 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1  C BF203070Ta19P027C02P059A071R1_027.ab1   141 
   91    BF203070Ta19P027C02P059A071F1_027.ab1    31 
   95  C BF203070Ta19P027C02P059A071R1_027.ab1    47 
  111    BF203070Ta19P027C02P059A071F1_027.ab1    51 
Contig length: old 178, new 179

Contig length: old 179, new 179
New start: 0