No. words: 252; after pruning: 226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.4 -0.4 (1,1:73)   52  1.39 0.00 4.17  BF203070Ta24P027C02P059A071F1_017.ab1        4    75 (44)  C BF203070Ta24P027C02P059A071R1_017.ab1   (64)    69     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.4       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  28 nodes

 16 str. conn. components

Path
    1  C BF203070Ta24P027C02P059A071R1_017.ab1   133 
   76    BF203070Ta24P027C02P059A071F1_017.ab1    15 
   80  C BF203070Ta24P027C02P059A071R1_017.ab1    54 
  112    BF203070Ta24P027C02P059A071F1_017.ab1    53 
Contig length: old 178, new 178

Contig length: old 178, new 178
New start: 0