No. words: 239; after pruning: 213


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.1 -1.1 (1,1:61)   49  0.00 0.00 3.23  BF203070Td05P027C02P059A071F1_007.ab1        1    62 (44)  C BF203070Td05P027C02P059A071R1_007.ab1   (73)    60     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  26 nodes

 15 str. conn. components

Path
    1  C BF203070Td05P027C02P059A071R1_007.ab1   133 
  113    BF203070Td05P027C02P059A071F1_007.ab1    40 
Contig length: old 177, new 179

Contig length: old 179, new 179
New start: 0