No. words: 1176; after pruning: 1150


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.1 (1,1:532)  507  0.00 0.00 0.00  BF291720At01P081A01P081A071F1_009.ab1        5   533 (64)  C BF291720At01P081A01P081A071R1_009.ab1   (50)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BF291720At01P081A01P081A071R1_009.ab1   579 
   78    BF291720At01P081A01P081A071F1_009.ab1    32 
   82  C BF291720At01P081A01P081A071R1_009.ab1   498 
   86    BF291720At01P081A01P081A071F1_009.ab1    40 
  110  C BF291720At01P081A01P081A071R1_009.ab1   470 
  118    BF291720At01P081A01P081A071F1_009.ab1    72 
  134  C BF291720At01P081A01P081A071R1_009.ab1   446 
  142    BF291720At01P081A01P081A071F1_009.ab1    96 
  146  C BF291720At01P081A01P081A071R1_009.ab1   434 
  150    BF291720At01P081A01P081A071F1_009.ab1   104 
  154  C BF291720At01P081A01P081A071R1_009.ab1   426 
  162    BF291720At01P081A01P081A071F1_009.ab1   116 
  174  C BF291720At01P081A01P081A071R1_009.ab1   406 
  178    BF291720At01P081A01P081A071F1_009.ab1   132 
  210  C BF291720At01P081A01P081A071R1_009.ab1   370 
  214    BF291720At01P081A01P081A071F1_009.ab1   168 
  294  C BF291720At01P081A01P081A071R1_009.ab1   286 
  306    BF291720At01P081A01P081A071F1_009.ab1   260 
  438  C BF291720At01P081A01P081A071R1_009.ab1   142 
  446    BF291720At01P081A01P081A071F1_009.ab1   400 
  454  C BF291720At01P081A01P081A071R1_009.ab1   126 
  478    BF291720At01P081A01P081A071F1_009.ab1   432 
  530  C BF291720At01P081A01P081A071R1_009.ab1    50 
  534    BF291720At01P081A01P081A071F1_009.ab1   488 
Contig length: old 643, new 643

Contig length: old 643, new 643
New start: 0