No. words: 1168; after pruning: 1142


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:528)  509  0.00 0.00 0.00  BF291720At02P081A01P081A071F1_007.ab1        1   529 (59)  C BF291720At02P081A01P081A071R1_007.ab1   (51)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BF291720At02P081A01P081A071R1_007.ab1   580 
   75    BF291720At02P081A01P081A071F1_007.ab1    24 
  175  C BF291720At02P081A01P081A071R1_007.ab1   406 
  179    BF291720At02P081A01P081A071F1_007.ab1   128 
  295  C BF291720At02P081A01P081A071R1_007.ab1   286 
  303    BF291720At02P081A01P081A071F1_007.ab1   252 
  435  C BF291720At02P081A01P081A071R1_007.ab1   146 
  439    BF291720At02P081A01P081A071F1_007.ab1   388 
  443  C BF291720At02P081A01P081A071R1_007.ab1   138 
  451    BF291720At02P081A01P081A071F1_007.ab1   400 
  455  C BF291720At02P081A01P081A071R1_007.ab1   126 
  475    BF291720At02P081A01P081A071F1_007.ab1   424 
  487  C BF291720At02P081A01P081A071R1_007.ab1    94 
  491    BF291720At02P081A01P081A071F1_007.ab1   440 
  507  C BF291720At02P081A01P081A071R1_007.ab1    74 
  511    BF291720At02P081A01P081A071F1_007.ab1   460 
  531  C BF291720At02P081A01P081A071R1_007.ab1    50 
  543    BF291720At02P081A01P081A071F1_007.ab1   492 
  547  C BF291720At02P081A01P081A071R1_007.ab1    34 
  551    BF291720At02P081A01P081A071F1_007.ab1   500 
  559  C BF291720At02P081A01P081A071R1_007.ab1    22 
  567    BF291720At02P081A01P081A071F1_007.ab1   516 
Contig length: old 639, new 639

Contig length: old 639, new 639
New start: 0