No. words: 898; after pruning: 872


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.7 (1,1:502)  312  1.16 0.29 0.29  BF291720Sn30P108C06P081A071F1_087.ab1        2   345 (3)  C BF291720Sn30P108C06P081A071R1_087.ab1   (48)   502   159 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  158 nodes

 81 str. conn. components

Path
    1  C BF291720Sn30P108C06P081A071R1_087.ab1   550 
Contig length: old 550, new 550

Contig length: old 550, new 550
New start: 0