No. words: 854; after pruning: 828


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:480)  284  2.78 0.31 0.00  BF291720Sn31P108C06P081A071F1_091.ab1        2   325 (0)  C BF291720Sn31P108C06P081A071R1_091.ab1   (48)   481   157 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BF291720Sn31P108C06P081A071R1_091.ab1   529 
Contig length: old 529, new 529

Contig length: old 529, new 529
New start: 0