No. words: 676; after pruning: 650


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.2 (1,1:470)  126  1.36 2.04 0.00  BF291720Sn32P108C06P081A071F1_085.ab1        3   149 (0)  C BF291720Sn32P108C06P081A071R1_085.ab1   (56)   471   322 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  66 nodes

 35 str. conn. components

Path
    1  C BF291720Sn32P108C06P081A071R1_085.ab1   527 
Contig length: old 527, new 527

Contig length: old 527, new 527
New start: 0