No. words: 740; after pruning: 714


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    8   -2.5 -2.5 (1,1:494)  155  2.23 1.12 0.00  BF291720Ta24P108C06P081A071F1_068.ab1        5   183 (9)  C BF291720Ta24P108C06P081A071R1_068.ab1   (56)   492   312 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.5       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1  C BF291720Ta24P108C06P081A071R1_068.ab1   548 
Contig length: old 548, new 548

Contig length: old 548, new 548
New start: 0