No. words: 1794; after pruning: 1768


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.3 (1,1:1584)  199  0.96 0.00 0.00  BF291730Ld04P081B01P081B071F1_030.ab1      695   903 (0)  C BF291730Ld04P081B01P081B071R1_030.ab1   (0)   891   683 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1    BF291730Ld04P081B01P081B071F1_030.ab1     1 
  774  C BF291730Ld04P081B01P081B071R1_030.ab1   812 
  778    BF291730Ld04P081B01P081B071F1_030.ab1   778 
  790  C BF291730Ld04P081B01P081B071R1_030.ab1   796 
  810    BF291730Ld04P081B01P081B071F1_030.ab1   810 
  818  C BF291730Ld04P081B01P081B071R1_030.ab1   768 
Contig length: old 1585, new 1585

Contig length: old 1585, new 1585
New start: 0