No. words: 1795; after pruning: 1769


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.2 (1,1:1602)  188  0.00 0.00 0.00  BF291730Ld06P081B01P081B071F1_026.ab1      704   895 (0)  C BF291730Ld06P081B01P081B071R1_026.ab1   (0)   900   709 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  98 nodes

 51 str. conn. components

Path
    1    BF291730Ld06P081B01P081B071F1_026.ab1     1 
  775  C BF291730Ld06P081B01P081B071R1_026.ab1   829 
  787    BF291730Ld06P081B01P081B071F1_026.ab1   787 
  799  C BF291730Ld06P081B01P081B071R1_026.ab1   805 
  807    BF291730Ld06P081B01P081B071F1_026.ab1   807 
  811  C BF291730Ld06P081B01P081B071R1_026.ab1   793 
  823    BF291730Ld06P081B01P081B071F1_026.ab1   823 
  827  C BF291730Ld06P081B01P081B071R1_026.ab1   777 
Contig length: old 1603, new 1603

Contig length: old 1603, new 1603
New start: 0