No. words: 1750; after pruning: 1724


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.5 (1,1:843)  762  0.13 0.00 0.00  BF291928Ld07P081C01P081C071F1_043.ab1       50   844 (111)  C BF291928Ld07P081C01P081C071R1_043.ab1   (0)   795     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1    BF291928Ld07P081C01P081C071F1_043.ab1     1 
  321  C BF291928Ld07P081C01P081C071R1_043.ab1   524 
  325    BF291928Ld07P081C01P081C071F1_043.ab1   325 
  357  C BF291928Ld07P081C01P081C071R1_043.ab1   488 
  365    BF291928Ld07P081C01P081C071F1_043.ab1   365 
  441  C BF291928Ld07P081C01P081C071R1_043.ab1   404 
  501    BF291928Ld07P081C01P081C071F1_043.ab1   501 
  525  C BF291928Ld07P081C01P081C071R1_043.ab1   320 
  773    BF291928Ld07P081C01P081C071F1_043.ab1   773 
  791  C BF291928Ld07P081C01P081C071R1_043.ab1    54 
  839    BF291928Ld07P081C01P081C071F1_043.ab1   839 
Contig length: old 955, new 955

Contig length: old 955, new 955
New start: 0