No. words: 1833; after pruning: 1807


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.5 (1,1:950)  844  0.11 0.00 0.00  BF291928Ld08P081C01P081C071F1_041.ab1       47   928 (0)  C BF291928Ld08P081C01P081C071R1_041.ab1   (0)   905    24 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  440 nodes

 222 str. conn. components

Path
    1    BF291928Ld08P081C01P081C071F1_041.ab1     1 
  294  C BF291928Ld08P081C01P081C071R1_041.ab1   658 
  302    BF291928Ld08P081C01P081C071F1_041.ab1   302 
  306  C BF291928Ld08P081C01P081C071R1_041.ab1   646 
  314    BF291928Ld08P081C01P081C071F1_041.ab1   314 
  322  C BF291928Ld08P081C01P081C071R1_041.ab1   630 
  326    BF291928Ld08P081C01P081C071F1_041.ab1   326 
  442  C BF291928Ld08P081C01P081C071R1_041.ab1   510 
  890    BF291928Ld08P081C01P081C071F1_041.ab1   890 
  901  C BF291928Ld08P081C01P081C071R1_041.ab1    51 
Contig length: old 951, new 951

Contig length: old 951, new 951
New start: 0