No. words: 1836; after pruning: 1810


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:944)  837  0.79 0.00 0.00  BF291928Ld11P081C01P081C071F1_035.ab1       34   924 (0)  C BF291928Ld11P081C01P081C071R1_035.ab1   (0)   912    22 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  436 nodes

 220 str. conn. components

Path
    1    BF291928Ld11P081C01P081C071F1_035.ab1     1 
  321  C BF291928Ld11P081C01P081C071R1_035.ab1   625 
  325    BF291928Ld11P081C01P081C071F1_035.ab1   325 
  337  C BF291928Ld11P081C01P081C071R1_035.ab1   609 
  345    BF291928Ld11P081C01P081C071F1_035.ab1   345 
  461  C BF291928Ld11P081C01P081C071R1_035.ab1   485 
  841    BF291928Ld11P081C01P081C071F1_035.ab1   841 
  857  C BF291928Ld11P081C01P081C071R1_035.ab1    89 
  897    BF291928Ld11P081C01P081C071F1_035.ab1   897 
  901  C BF291928Ld11P081C01P081C071R1_035.ab1    45 
Contig length: old 945, new 945

Contig length: old 945, new 945
New start: 0