No. words: 1152; after pruning: 1126


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:1004)  143  0.00 0.00 0.00  BF291928Tu02P081C01P081C071F1_010.ab1      453   599 (0)  C BF291928Tu02P081C01P081C071R1_010.ab1   (0)   553   407 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  76 nodes

 40 str. conn. components

Path
    1    BF291928Tu02P081C01P081C071F1_010.ab1     1 
  500  C BF291928Tu02P081C01P081C071R1_010.ab1   506 
  504    BF291928Tu02P081C01P081C071F1_010.ab1   504 
  516  C BF291928Tu02P081C01P081C071R1_010.ab1   490 
  532    BF291928Tu02P081C01P081C071F1_010.ab1   532 
  536  C BF291928Tu02P081C01P081C071R1_010.ab1   470 
Contig length: old 1005, new 1005

Contig length: old 1005, new 1005
New start: 0