No. words: 1711; after pruning: 1685


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:873)  803  0.48 0.00 0.24  BF292295Ld08P114D02P114D051F1_043.ab1       10   846 (0)  C BF292295Ld08P114D02P114D051R1_043.ab1   (1)   864    30 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1    BF292295Ld08P114D02P114D051F1_043.ab1     1 
   33  C BF292295Ld08P114D02P114D051R1_043.ab1   842 
   44    BF292295Ld08P114D02P114D051F1_043.ab1    45 
  287  C BF292295Ld08P114D02P114D051R1_043.ab1   588 
  291    BF292295Ld08P114D02P114D051F1_043.ab1   292 
  355  C BF292295Ld08P114D02P114D051R1_043.ab1   520 
  359    BF292295Ld08P114D02P114D051F1_043.ab1   360 
  371  C BF292295Ld08P114D02P114D051R1_043.ab1   504 
  427    BF292295Ld08P114D02P114D051F1_043.ab1   428 
  447  C BF292295Ld08P114D02P114D051R1_043.ab1   428 
  455    BF292295Ld08P114D02P114D051F1_043.ab1   456 
  487  C BF292295Ld08P114D02P114D051R1_043.ab1   388 
  835    BF292295Ld08P114D02P114D051F1_043.ab1   836 
  839  C BF292295Ld08P114D02P114D051R1_043.ab1    36 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0