No. words: 1644; after pruning: 1618


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:878)  754  0.00 0.00 0.00  BF292295Ld17P114D02P114D051F1_033.ab1       54   818 (0)  C BF292295Ld17P114D02P114D051R1_033.ab1   (0)   826    62 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    BF292295Ld17P114D02P114D051F1_033.ab1     1 
  125  C BF292295Ld17P114D02P114D051R1_033.ab1   755 
  129    BF292295Ld17P114D02P114D051F1_033.ab1   129 
  293  C BF292295Ld17P114D02P114D051R1_033.ab1   587 
  301    BF292295Ld17P114D02P114D051F1_033.ab1   301 
  325  C BF292295Ld17P114D02P114D051R1_033.ab1   555 
  329    BF292295Ld17P114D02P114D051F1_033.ab1   329 
  361  C BF292295Ld17P114D02P114D051R1_033.ab1   519 
  373    BF292295Ld17P114D02P114D051F1_033.ab1   373 
  405  C BF292295Ld17P114D02P114D051R1_033.ab1   475 
  425    BF292295Ld17P114D02P114D051F1_033.ab1   425 
  429  C BF292295Ld17P114D02P114D051R1_033.ab1   451 
  465    BF292295Ld17P114D02P114D051F1_033.ab1   465 
  469  C BF292295Ld17P114D02P114D051R1_033.ab1   411 
  477    BF292295Ld17P114D02P114D051F1_033.ab1   477 
  481  C BF292295Ld17P114D02P114D051R1_033.ab1   399 
  497    BF292295Ld17P114D02P114D051F1_033.ab1   497 
  505  C BF292295Ld17P114D02P114D051R1_033.ab1   375 
  589    BF292295Ld17P114D02P114D051F1_033.ab1   589 
  593  C BF292295Ld17P114D02P114D051R1_033.ab1   287 
  697    BF292295Ld17P114D02P114D051F1_033.ab1   697 
  701  C BF292295Ld17P114D02P114D051R1_033.ab1   179 
  737    BF292295Ld17P114D02P114D051F1_033.ab1   737 
  741  C BF292295Ld17P114D02P114D051R1_033.ab1   139 
  745    BF292295Ld17P114D02P114D051F1_033.ab1   745 
  757  C BF292295Ld17P114D02P114D051R1_033.ab1   123 
  789    BF292295Ld17P114D02P114D051F1_033.ab1   789 
  793  C BF292295Ld17P114D02P114D051R1_033.ab1    87 
  801    BF292295Ld17P114D02P114D051F1_033.ab1   801 
  805  C BF292295Ld17P114D02P114D051R1_033.ab1    75 
Contig length: old 879, new 879

Contig length: old 879, new 879
New start: 0